PRIORITY RESEARCH PAPER


Tissue- and age-dependent expression of RNA-binding proteins that influence mRNA turnover and translation

Kiyoshi Masuda1, Bernard Marasa1, Jennifer L. Martindale1, Marc K. Halushka2, and Myriam Gorospe1
1 Laboratory of Cellular and Molecular Biology, NIA-IRP, NIH, Baltimore, MD 21224, USA
2 Department of Pathology, The Johns Hopkins University, Baltimore, Maryland 21231, USA
Running title:
Age- and tissue-dependent distribution of human RBPs
Key words:
HuR, AUF1, TIA-1, TTP, TTR-RBPs, senescence
Abbreviations:
AUF1, AU-RNA binding protein 1; HuR, human antigen R; TIA-1, T-cell inhibitor of apoptosis-1; TTP, tristetraprolin; TTR-RBP, translation and turnover regulatory RNA-binding protein; UTR, untranslated region
Received:
07/08/09; accepted: 07/24/09; published on line: 07/26/09
Correspondence:
E-mail:

Abstract

Gene expression patterns vary dramatically in a tissue-specific and age-dependent manner. RNA-binding proteins that regulate mRNA turnover and/or translation (TTR-RBPs) critically affect the subsets of expressed proteins. However, very little is known regarding the tissue- and age-dependent expression of TTR-RBPs in humans. Here, we use human tissue arrays containing a panel of organ biopsies from donors of different ages, to study the distribution and abundance of four TTR-RBPs: HuR, AUF1, TIA-1, and TTP. HuR and AUF1 were expressed with remarkably similar patterns. Both TTR-RBPs were present in high percentages of cells and displayed elevated intensities in many age groups and tissues, most notably in the gastrointestinal and reproductive systems; they were moderately expressed in the urinary and immune systems, and were almost undetectable in muscle and brain. TIA-1 was also abundant in many tissues and age groups; TIA-1 was expressed at high levels in the gastrointestinal, immune, urinary, and reproductive systems, and at low levels in brain and muscle. By contrast, TTP-expressing cells, as well as TTP signal intensities declined with advancing age, particularly in the immune, nervous, and muscular systems; however, TTP levels remained elevated in the gastrointestinal tract. The widespread abundance of HuR, AUF1, and TIA-1 throughout the body and in all age groups was in stark contrast with their declining levels in human diploid fibroblasts (HDFs) undergoing replicative senescence, a cultured-cell model of aging. Conversely, TTP levels increased in senescent HDFs, while TTP levels decreased with advancing age. Our studies provide a framework for the study of human TTR-RBP function in different tissues, throughout the human life span.